Protein Shell::Core::Face Comparison Server
INTER
PARE
The Protein Interfaceome Database
Home
Search
HowTo
Background
Download
References
Statistic
Acknowledgement
Search
1. Search by keywords or ID
Keyword
ID
2. Search by sequence
[
read more about PDB-ISL
], [
example
]
File Upload :
(Input protein sequences in
FASTA format
)
Algorithm
blastpgp
fasta
ssearch
E-value
1
0.05
1e-4
1e-5
MAX Iteraction
1
2
3
4
5
6
7
8
9
10
PDB_ISL Ver.
PDB_ISL_v155
PDB_ISL_1e-4
PDB_ISL_1e-6
PDB_ISL_v155+BIND
PDB_ISL_1e-4+BIND
PDB_ISL_1e-6+BIND
3. Search by PDB ID
OPTIONS
PDB ID
(Ex: 1A25)
Relative ASA(%)
5
10
15
20
25
30
Interface Threshold
1
2
3
4
5
Å
2
3.0
3.5
4.0
4.5
5.0
Å
